Volumetric Data
Let's start with our trusty ImageJ toolbar and an empty sciview scene.
Now open the script editor by first clicking on the ImageJ toolbar then pressing "[". Download and open this script in the sceipt editor to generate a 3D image volume that we can use
Now press "Run" or Ctrl + r
You can close the script editor, then "Add volume" in sciview.
Then you will get a dialog, where you can change the resolution of your volume's voxels (for example, if you are using confocal microscopy data your z-resolution will be much larger)
Your volume should open up in the sciview window
Now let's do something fun. Start an animation to circle around your volume
Start recording a video
After some time, stop recording the videos
Let's change the colormap of a volume
Voila, now we have a new colormap
Let's change the transfer function
Voila, now we have a new transfer function
No problem! Try the "Volume Timeseries" demo
You'll get a volume that looks like this
Now press play and enjoy
Last modified 2yr ago